STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
src-2Tyrosine-protein kinase. (512 aa)    
Predicted Functional Partners:
ssr-2
Protein CBR-SSR-2.
   
 0.789
kin-32
Protein CBR-KIN-32; Belongs to the protein kinase superfamily. Tyr protein kinase family.
   
0.782
sta-1
Signal transducer and activator of transcription 1; Carries out a dual function: signal transduction and activation of transcription. Activated STAT proteins play a role in repression of dauer formation. Neuronal expression is held in check by negative signals through the TGF-beta pathway that target the daf-3 transcription factor (By similarity).
   
 0.781
syg-2
Protein CBR-SYG-2.
    
 0.745
lin-45
Raf homolog serine/threonine-protein kinase; Protein kinase that participates in the induction of vulva and has a role in fertility and viability. Acts downstream of the Ras protein let-60. Required for progression of developing oocytes through the pachytene stage. Positively regulates lifespan upstream of mek-2 and mpk-1.
  
0.731
zig-10
Protein CBG02647.
   
 0.710
sli-1
Protein CBR-SLI-1.
    
 0.705
let-23
Receptor protein-tyrosine kinase.
  
 
0.698
CBG12069
Protein CBG12069.
   
 0.697
unc-89
Protein CBR-UNC-89.
   
 0.697
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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