Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CBG12069 | lin-45 | A8XEH4 | Q61UC4 | Protein CBG12069. | Raf homolog serine/threonine-protein kinase; Protein kinase that participates in the induction of vulva and has a role in fertility and viability. Acts downstream of the Ras protein let-60. Required for progression of developing oocytes through the pachytene stage. Positively regulates lifespan upstream of mek-2 and mpk-1. | 0.601 |
CBG12069 | src-2 | A8XEH4 | A8X798 | Protein CBG12069. | Tyrosine-protein kinase. | 0.697 |
CBG12069 | ssr-2 | A8XEH4 | A8WRV4 | Protein CBG12069. | Protein CBR-SSR-2. | 0.829 |
CBG12069 | syg-2 | A8XEH4 | A8X4J5 | Protein CBG12069. | Protein CBR-SYG-2. | 0.435 |
CBG12069 | unc-89 | A8XEH4 | A8XEH5 | Protein CBG12069. | Protein CBR-UNC-89. | 0.479 |
kin-32 | let-23 | A8XBU1 | A8WPC3 | Protein CBR-KIN-32; Belongs to the protein kinase superfamily. Tyr protein kinase family. | Receptor protein-tyrosine kinase. | 0.736 |
kin-32 | src-2 | A8XBU1 | A8X798 | Protein CBR-KIN-32; Belongs to the protein kinase superfamily. Tyr protein kinase family. | Tyrosine-protein kinase. | 0.782 |
let-23 | kin-32 | A8WPC3 | A8XBU1 | Receptor protein-tyrosine kinase. | Protein CBR-KIN-32; Belongs to the protein kinase superfamily. Tyr protein kinase family. | 0.736 |
let-23 | lin-45 | A8WPC3 | Q61UC4 | Receptor protein-tyrosine kinase. | Raf homolog serine/threonine-protein kinase; Protein kinase that participates in the induction of vulva and has a role in fertility and viability. Acts downstream of the Ras protein let-60. Required for progression of developing oocytes through the pachytene stage. Positively regulates lifespan upstream of mek-2 and mpk-1. | 0.667 |
let-23 | sli-1 | A8WPC3 | A8X5V5 | Receptor protein-tyrosine kinase. | Protein CBR-SLI-1. | 0.998 |
let-23 | src-2 | A8WPC3 | A8X798 | Receptor protein-tyrosine kinase. | Tyrosine-protein kinase. | 0.698 |
let-23 | ssr-2 | A8WPC3 | A8WRV4 | Receptor protein-tyrosine kinase. | Protein CBR-SSR-2. | 0.516 |
let-23 | sta-1 | A8WPC3 | Q61AP6 | Receptor protein-tyrosine kinase. | Signal transducer and activator of transcription 1; Carries out a dual function: signal transduction and activation of transcription. Activated STAT proteins play a role in repression of dauer formation. Neuronal expression is held in check by negative signals through the TGF-beta pathway that target the daf-3 transcription factor (By similarity). | 0.976 |
lin-45 | CBG12069 | Q61UC4 | A8XEH4 | Raf homolog serine/threonine-protein kinase; Protein kinase that participates in the induction of vulva and has a role in fertility and viability. Acts downstream of the Ras protein let-60. Required for progression of developing oocytes through the pachytene stage. Positively regulates lifespan upstream of mek-2 and mpk-1. | Protein CBG12069. | 0.601 |
lin-45 | let-23 | Q61UC4 | A8WPC3 | Raf homolog serine/threonine-protein kinase; Protein kinase that participates in the induction of vulva and has a role in fertility and viability. Acts downstream of the Ras protein let-60. Required for progression of developing oocytes through the pachytene stage. Positively regulates lifespan upstream of mek-2 and mpk-1. | Receptor protein-tyrosine kinase. | 0.667 |
lin-45 | sli-1 | Q61UC4 | A8X5V5 | Raf homolog serine/threonine-protein kinase; Protein kinase that participates in the induction of vulva and has a role in fertility and viability. Acts downstream of the Ras protein let-60. Required for progression of developing oocytes through the pachytene stage. Positively regulates lifespan upstream of mek-2 and mpk-1. | Protein CBR-SLI-1. | 0.562 |
lin-45 | src-2 | Q61UC4 | A8X798 | Raf homolog serine/threonine-protein kinase; Protein kinase that participates in the induction of vulva and has a role in fertility and viability. Acts downstream of the Ras protein let-60. Required for progression of developing oocytes through the pachytene stage. Positively regulates lifespan upstream of mek-2 and mpk-1. | Tyrosine-protein kinase. | 0.731 |
lin-45 | ssr-2 | Q61UC4 | A8WRV4 | Raf homolog serine/threonine-protein kinase; Protein kinase that participates in the induction of vulva and has a role in fertility and viability. Acts downstream of the Ras protein let-60. Required for progression of developing oocytes through the pachytene stage. Positively regulates lifespan upstream of mek-2 and mpk-1. | Protein CBR-SSR-2. | 0.743 |
lin-45 | sta-1 | Q61UC4 | Q61AP6 | Raf homolog serine/threonine-protein kinase; Protein kinase that participates in the induction of vulva and has a role in fertility and viability. Acts downstream of the Ras protein let-60. Required for progression of developing oocytes through the pachytene stage. Positively regulates lifespan upstream of mek-2 and mpk-1. | Signal transducer and activator of transcription 1; Carries out a dual function: signal transduction and activation of transcription. Activated STAT proteins play a role in repression of dauer formation. Neuronal expression is held in check by negative signals through the TGF-beta pathway that target the daf-3 transcription factor (By similarity). | 0.445 |
lin-45 | unc-89 | Q61UC4 | A8XEH5 | Raf homolog serine/threonine-protein kinase; Protein kinase that participates in the induction of vulva and has a role in fertility and viability. Acts downstream of the Ras protein let-60. Required for progression of developing oocytes through the pachytene stage. Positively regulates lifespan upstream of mek-2 and mpk-1. | Protein CBR-UNC-89. | 0.601 |
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