STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abi-1Protein CBR-ABI-1. (487 aa)    
Predicted Functional Partners:
gex-2
Protein CBR-GEX-2.
   
 0.997
gex-3
Protein CBR-GEX-3.
   
 0.997
wve-1
Protein CBR-WVE-1.
   
 0.997
CBG26242
Protein CBG26242.
    
 0.993
abl-1
Tyrosine-protein kinase.
    
 0.992
mig-10
Protein CBR-MIG-10.
   
 
 0.896
ced-10
Protein CBG15031.
    
 0.890
CBG27575
Protein CBG27575.
    
 0.880
ced-5
Protein CBR-CED-5; Belongs to the DOCK family.
     
 0.839
nck-1
Protein CBR-NCK-1.
  
 
 0.835
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.