STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG09020Protein CBG09020. (677 aa)    
Predicted Functional Partners:
abch-1
Protein CBR-ABCH-1.
   
0.713
CBG09230
Protein CBG09230.
   
  
 0.702
CBG18926
Protein CBG18926.
  
  
 0.695
dhs-14.1
Protein CBR-DHS-14.
   
 
 0.642
CBG19305
Protein CBG19305.
      
 0.629
Cbr-elo-8
Elongation of very long chain fatty acids protein.
   
  
 0.563
CBG12665
Protein CBG12665.
      
 0.533
gst-22
Protein CBR-GST-35; Belongs to the GST superfamily.
      
 0.531
CBG04149
Protein CBG04149.
   
  
 0.521
gska-3
Protein CBR-GSKA-3.
   
  
 0.521
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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