STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sqv-4UDP-glucose 6-dehydrogenase; Involved in the biosynthesis of glycosaminoglycans; hyaluronan, chondroitin sulfate, and heparan sulfate. Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (481 aa)    
Predicted Functional Partners:
sqv-1
Protein CBR-SQV-1.
 0.998
CBG03656
Protein CBG03656.
  
 
 0.992
CBG05010
Protein CBG05010.
  
  
 0.980
CBG18265
UTP--glucose-1-phosphate uridylyltransferase.
     
 0.958
CBG24514
UTP--glucose-1-phosphate uridylyltransferase.
     
 0.954
CBG14085
Protein CBG14085.
  
  
 0.928
CBG03599
Galactose-1-phosphate uridylyltransferase; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family.
    
 0.837
CBG02636
Protein CBG02636; Belongs to the 3-beta-HSD family.
  
 0.762
hsd-2
Protein CBG14581; Belongs to the 3-beta-HSD family.
  
 0.762
hsd-3
Protein CBG14582; Belongs to the 3-beta-HSD family.
  
 0.762
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.