STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mboa-6Protein CBG11740; Belongs to the membrane-bound acyltransferase family. (475 aa)    
Predicted Functional Partners:
mboa-3
Protein CBG14799; Belongs to the membrane-bound acyltransferase family.
     
0.931
mboa-4
Protein CBG00365; Belongs to the membrane-bound acyltransferase family.
     
0.923
cept-1
Protein CBR-CEPT-1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
 
 0.912
cept-2
Protein CBG04633; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
 
 0.912
CBG19099
Protein CBG19099.
     
 0.902
pld-1
Phospholipase.
     
 0.901
CBG21934
Protein CBG21934.
     
 0.901
psd-1
Phosphatidylserine decarboxylase proenzyme, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type I sub-subfamily.
     
  0.900
pssy-1
Protein CBR-PSSY-1.
     
  0.900
CBG06931
Protein CBG06931.
     
  0.900
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.