STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG13199Protein CBG13199. (268 aa)    
Predicted Functional Partners:
CBG02248
Protein CBG02248.
      
 0.872
strl-1
Protein CBG03834.
   
  
 0.871
Cbr-tag-340
Protein CBR-TAG-340.
   
  
 0.865
gei-1
Protein CBR-GEI-1.
      
 0.728
CBG25883
Protein CBG25883.
      
 0.728
CBG23110
Protein CBG23110.
      
0.587
CBG07384
Protein CBG07384.
   
  
 0.571
dnj-9
Protein CBR-DNJ-9.
   
    0.424
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.