Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CBG12105 | CBG18556 | A8XER9 | A8XTK4 | Protein CBG12105. | Protein CBG18556. | 0.828 |
CBG12105 | ags-3 | A8XER9 | A8XKD8 | Protein CBG12105. | Protein CBR-AGS-3. | 0.472 |
CBG12105 | gpa-16 | A8XER9 | Q60XS3 | Protein CBG12105. | Guanine nucleotide-binding protein alpha-16 subunit; Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems. In the 1-cell embryo, probably together with goa-1, controls nuclear rotation and spindle elongation during mitosis. During the first embryonic cell divisons, plays a role in gpr-1/2 cortical localization and in the proper orientation of EMS blastomere mitotic spindle; Belongs to the G-alpha family. | 0.828 |
CBG12105 | gpa-4 | A8XER9 | Q61B55 | Protein CBG12105. | Guanine nucleotide-binding protein alpha-4 subunit; Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems; Belongs to the G-alpha family. G(i/o/t/z) subfamily. | 0.828 |
CBG12105 | gpb-1 | A8XER9 | Q61ZF6 | Protein CBG12105. | Guanine nucleotide-binding protein subunit beta-1; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. In the early embryo, controls the magnitude of the forces acting on centrosomes but is not required for generating asymmetric forces. | 0.590 |
CBG12105 | gpb-2 | A8XER9 | A8XEK3 | Protein CBG12105. | Protein CBR-GPB-2. | 0.540 |
CBG12105 | gpc-1 | A8XER9 | Q4VT26 | Protein CBG12105. | Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. | 0.962 |
CBG12105 | gpc-2 | A8XER9 | Q4VT25 | Protein CBG12105. | Protein CBR-GPC-2. | 0.959 |
CBG12105 | gsa-1 | A8XER9 | A8Y1H2 | Protein CBG12105. | Protein CBR-GSA-1. | 0.967 |
CBG18556 | CBG12105 | A8XTK4 | A8XER9 | Protein CBG18556. | Protein CBG12105. | 0.828 |
CBG18556 | ags-3 | A8XTK4 | A8XKD8 | Protein CBG18556. | Protein CBR-AGS-3. | 0.834 |
CBG18556 | gpa-16 | A8XTK4 | Q60XS3 | Protein CBG18556. | Guanine nucleotide-binding protein alpha-16 subunit; Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems. In the 1-cell embryo, probably together with goa-1, controls nuclear rotation and spindle elongation during mitosis. During the first embryonic cell divisons, plays a role in gpr-1/2 cortical localization and in the proper orientation of EMS blastomere mitotic spindle; Belongs to the G-alpha family. | 0.543 |
CBG18556 | gpa-4 | A8XTK4 | Q61B55 | Protein CBG18556. | Guanine nucleotide-binding protein alpha-4 subunit; Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems; Belongs to the G-alpha family. G(i/o/t/z) subfamily. | 0.834 |
CBG18556 | gpb-1 | A8XTK4 | Q61ZF6 | Protein CBG18556. | Guanine nucleotide-binding protein subunit beta-1; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. In the early embryo, controls the magnitude of the forces acting on centrosomes but is not required for generating asymmetric forces. | 0.926 |
CBG18556 | gpb-2 | A8XTK4 | A8XEK3 | Protein CBG18556. | Protein CBR-GPB-2. | 0.828 |
CBG18556 | gpc-1 | A8XTK4 | Q4VT26 | Protein CBG18556. | Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. | 0.810 |
CBG18556 | gpc-2 | A8XTK4 | Q4VT25 | Protein CBG18556. | Protein CBR-GPC-2. | 0.898 |
CBG18556 | gsa-1 | A8XTK4 | A8Y1H2 | Protein CBG18556. | Protein CBR-GSA-1. | 0.750 |
CBG18556 | ric-8 | A8XTK4 | Q61A92 | Protein CBG18556. | Synembryn; Guanine nucleotide exchange factor (GEF), which can activate some, but not all, G-alpha proteins independently of G-protein coupled receptors. Acts by exchanging bound GDP for free GTP. Also able to activate the G(s)-alpha in synaptic signaling network. Plays a key role in asymmetric spindle positioning, a step for asymmetric cell division that generates cell diversity during development by activating G(i) alpha protein goa-1 and gpa-16 independently of G-protein coupled receptors (By similarity); Belongs to the synembryn family. | 0.841 |
ags-3 | CBG12105 | A8XKD8 | A8XER9 | Protein CBR-AGS-3. | Protein CBG12105. | 0.472 |
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