STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hex-1Beta-hexosaminidase A; Responsible for the degradation of GM2 gangliosides, and a variety of other molecules containing terminal N-acetyl hexosamines. Degrades chitotriose (By similarity). (552 aa)    
Predicted Functional Partners:
hex-3
Protein CBR-HEX-3.
     
 0.985
hex-5
Protein CBR-HEX-5.
     
 0.983
hex-2
Protein CBR-HEX-2.
     
 0.983
gana-1
Alpha-galactosidase.
   
 
 0.965
bgal-2
Protein CBG10890.
  
 
 0.955
bgal-1
Beta-galactosidase.
  
 
 0.955
CBG02718
Protein CBG02718; Belongs to the glycosyl hydrolase 18 family.
    
 0.942
CBG02714
Protein CBG02714; Belongs to the glycosyl hydrolase 18 family.
    
 0.942
CBG02710
Protein CBG02710; Belongs to the glycosyl hydrolase 18 family.
    
 0.942
CBG04889
Protein CBG04889; Belongs to the glycosyl hydrolase 18 family.
    
 0.942
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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