STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aqp-7Protein CBR-AQP-7; Belongs to the MIP/aquaporin (TC 1.A.8) family. (302 aa)    
Predicted Functional Partners:
aqp-6
Protein CBR-AQP-6; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
  
 0.912
aqp-11
Aquaporin; Belongs to the MIP/aquaporin (TC 1.A.8) family.
     
 0.817
aqp-5
Protein CBR-AQP-5; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
  
 0.740
ttc-37
Protein CBG08701.
      
 0.725
CBG18455
Protein CBG18455.
  
 
 0.675
CBG10994
Protein CBG10994.
  
 
 0.668
CBG18255
Protein CBG18255.
  
 
 0.668
nhx-5
Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
     
 0.640
nhx-4
Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
     
 0.639
nhx-1
Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
     
 0.639
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.