STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
unc-97LIM domain-containing protein. (353 aa)    
Predicted Functional Partners:
Cbr-pat-4
Protein CBR-PAT-4.
   
 0.999
rsu-1
Protein CBR-RSU-1.
   
 0.997
pat-6
Protein CBR-PAT-6.
   
 0.995
unc-112
Protein CBR-UNC-112.
   
 
 0.961
pin-2
Protein CBR-PIN-2.
  
  
 
0.892
unc-98
Zinc finger protein unc-98; Probable transcription factor. Required for muscle structure. Its dual subcellular localization suggests that it may function both as a muscle adhesion complex protein and as a transcription factor, or work together with transcription factors, to influence gene expression. Thought to act as a molecular bridge between unc-97 and mhc-a at the M- line of muscles, possibly in a signaling role (By similarity).
    
 
 0.878
unc-96
Protein CBR-UNC-96.
      
 0.851
unc-95
Protein CBR-UNC-95.
    
 
 0.828
lim-8
Protein CBR-LIM-8.
      
 0.827
unc-89
Protein CBR-UNC-89.
      
 0.798
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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