Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cbr-pat-4 | lim-8 | A8XMT5 | A8XPG8 | Protein CBR-PAT-4. | Protein CBR-LIM-8. | 0.454 |
Cbr-pat-4 | pat-6 | A8XMT5 | A8Y2J2 | Protein CBR-PAT-4. | Protein CBR-PAT-6. | 0.999 |
Cbr-pat-4 | pin-2 | A8XMT5 | A8Y218 | Protein CBR-PAT-4. | Protein CBR-PIN-2. | 0.967 |
Cbr-pat-4 | rsu-1 | A8XMT5 | A8X9M9 | Protein CBR-PAT-4. | Protein CBR-RSU-1. | 0.965 |
Cbr-pat-4 | unc-112 | A8XMT5 | A8WXX4 | Protein CBR-PAT-4. | Protein CBR-UNC-112. | 0.998 |
Cbr-pat-4 | unc-89 | A8XMT5 | A8XEH5 | Protein CBR-PAT-4. | Protein CBR-UNC-89. | 0.746 |
Cbr-pat-4 | unc-95 | A8XMT5 | A8X7A5 | Protein CBR-PAT-4. | Protein CBR-UNC-95. | 0.719 |
Cbr-pat-4 | unc-96 | A8XMT5 | A8X5W8 | Protein CBR-PAT-4. | Protein CBR-UNC-96. | 0.626 |
Cbr-pat-4 | unc-97 | A8XMT5 | A8XKH8 | Protein CBR-PAT-4. | LIM domain-containing protein. | 0.999 |
Cbr-pat-4 | unc-98 | A8XMT5 | Q612G6 | Protein CBR-PAT-4. | Zinc finger protein unc-98; Probable transcription factor. Required for muscle structure. Its dual subcellular localization suggests that it may function both as a muscle adhesion complex protein and as a transcription factor, or work together with transcription factors, to influence gene expression. Thought to act as a molecular bridge between unc-97 and mhc-a at the M- line of muscles, possibly in a signaling role (By similarity). | 0.708 |
lim-8 | Cbr-pat-4 | A8XPG8 | A8XMT5 | Protein CBR-LIM-8. | Protein CBR-PAT-4. | 0.454 |
lim-8 | pat-6 | A8XPG8 | A8Y2J2 | Protein CBR-LIM-8. | Protein CBR-PAT-6. | 0.632 |
lim-8 | unc-112 | A8XPG8 | A8WXX4 | Protein CBR-LIM-8. | Protein CBR-UNC-112. | 0.651 |
lim-8 | unc-89 | A8XPG8 | A8XEH5 | Protein CBR-LIM-8. | Protein CBR-UNC-89. | 0.702 |
lim-8 | unc-95 | A8XPG8 | A8X7A5 | Protein CBR-LIM-8. | Protein CBR-UNC-95. | 0.766 |
lim-8 | unc-96 | A8XPG8 | A8X5W8 | Protein CBR-LIM-8. | Protein CBR-UNC-96. | 0.748 |
lim-8 | unc-97 | A8XPG8 | A8XKH8 | Protein CBR-LIM-8. | LIM domain-containing protein. | 0.827 |
lim-8 | unc-98 | A8XPG8 | Q612G6 | Protein CBR-LIM-8. | Zinc finger protein unc-98; Probable transcription factor. Required for muscle structure. Its dual subcellular localization suggests that it may function both as a muscle adhesion complex protein and as a transcription factor, or work together with transcription factors, to influence gene expression. Thought to act as a molecular bridge between unc-97 and mhc-a at the M- line of muscles, possibly in a signaling role (By similarity). | 0.705 |
pat-6 | Cbr-pat-4 | A8Y2J2 | A8XMT5 | Protein CBR-PAT-6. | Protein CBR-PAT-4. | 0.999 |
pat-6 | lim-8 | A8Y2J2 | A8XPG8 | Protein CBR-PAT-6. | Protein CBR-LIM-8. | 0.632 |
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