STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lgx-1Protein CBR-LGX-1. (1898 aa)    
Predicted Functional Partners:
chs-2
Protein CBR-CHS-2.
   
  
 0.718
chs-1
Protein CBR-CHS-1.
      
 0.643
dab-1
Protein CBR-DAB-1.
   
 0.473
CBG10108
Protein CBG10108.
   
 
  0.436
CBG20782
Protein CBG20782.
    
 0.429
CBG07574
Protein CBG07574.
   
    0.418
CBG15282
Protein CBG15282.
   
   
0.418
CBG03226
Protein CBG03226.
   
  0.410
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.