STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
npr-22Protein CBG15641; Belongs to the G-protein coupled receptor 1 family. (438 aa)    
Predicted Functional Partners:
flp-7
Protein CBR-FLP-7.
    
 
 0.908
frpr-3
Protein CBR-FRPR-3; Belongs to the G-protein coupled receptor 1 family.
  
 
 0.843
flp-11
Protein CBR-FLP-11.
    
 
 0.766
flp-22
Protein CBG25200.
    
 
 0.763
lury-1
Protein CBG23020.
      
 0.744
flp-18
Protein CBR-FLP-18.
      
 0.730
egl-6
Protein CBG14781.
  
   
 0.708
CBG06696
Protein CBG06696.
    
 0.698
flp-15
Protein CBR-FLP-15.
      
 0.686
flp-9
Protein CBR-FLP-9.
    
 
 0.663
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.