STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG15772Protein CBG15772. (369 aa)    
Predicted Functional Partners:
CBG20552
Protein CBG20552.
   
  
 0.634
CBG20352
Protein CBG20352.
   
  
 0.552
CBG03993
Protein CBG03993.
      
 0.548
CBG12310
Protein CBG12310.
      
 0.529
CBG04590
Protein CBG04590.
   
  
 0.521
twnk-1
Protein CBG14751.
      
 0.501
CBG04453
Protein CBG04453.
   
  
 0.486
CBG19373
Protein CBG19373.
   
    0.424
CBG20109
Protein CBG20109.
   
  
 0.423
CBG09731
Protein CBG09731.
   
  
 0.400
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.