STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG15946Probable medium-chain specific acyl-CoA dehydrogenase 1, mitochondrial; This enzyme is specific for acyl chain lengths of 4 to 16. Belongs to the acyl-CoA dehydrogenase family. (417 aa)    
Predicted Functional Partners:
acaa-2
Protein CBG24278; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.974
CBG06885
Protein CBG06885; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.972
ech-1.2
Protein CBG12562.
  
 0.968
kat-1
Protein CBR-KAT-1; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.964
CBG24740
Protein CBG24740; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.962
ech-7
Protein CBR-ECH-7; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.962
CBG09979
Protein CBG09979; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.962
ech-6
Protein CBR-ECH-6; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.962
CBG06810
Protein CBG06810.
  
 
 0.954
mccc-1
Protein CBG03464.
  
 
 0.949
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.