STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG17732Protein CBG17732. (415 aa)    
Predicted Functional Partners:
unc-84
Protein CBR-UNC-84.
     
 0.634
CBG16940
Protein CBG16940.
    
 
0.553
CBG23752
Protein CBG23752.
     
 
0.540
CBG24704
Protein CBG24704.
     
 
0.540
CBG24883
Protein CBG24883.
     
 
0.540
CBG04402
Protein CBG04402.
     
 
0.540
CBG04403
Protein CBG04403.
     
 
0.540
CBG04468
Protein CBG04468.
     
 
0.540
CBG08332
Protein CBG08332.
     
 
0.540
CBG16942
Protein CBG16942.
     
 
0.540
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.