STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sup-9Two pore potassium channel protein sup-9. (325 aa)    
Predicted Functional Partners:
sup-10
Protein CBR-SUP-10.
      
 0.988
sup-18
Protein CBG12270.
      
 0.956
unc-93
Protein CBR-UNC-93.
      
 0.948
twk-4
Protein CBR-TWK-4; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
  
 
0.721
twk-46
Two pore potassium channel protein sup-9.
   
 
0.663
twk-14
Protein CBR-TWK-14; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
     
0.662
polq-1
Protein CBR-POLQ-1.
      
 0.634
CBG03693
Protein CBG03693.
   
 
 0.499
twk-7
Protein CBR-TWK-7; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
   
 
0.499
Cbr-twk-2
Protein CBR-TWK-2; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
   
 
0.499
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.