STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG19651Protein CBG19651; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. (1166 aa)    
Predicted Functional Partners:
nkb-1
Protein CBR-NKB-1.
   
 0.684
nkb-2
Protein CBR-NKB-2.
   
 0.684
nkb-3
Probable sodium/potassium-transporting ATPase subunit beta-3; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The beta subunit regulates, through assembly of alpha/beta heterodimers, the number of sodium pumps transported to the plasma membrane. Implicated in genomic response to various soil bacteria that affects fitness, lifespan and brood size (By similarity).
   
 0.684
cua-1
Protein CBR-CUA-1.
  
0.491
rps-7
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
      
 0.487
CBG23873
Protein CBG23873; Belongs to the CDC50/LEM3 family.
    
 0.458
chat-1
Protein CBR-CHAT-1; Belongs to the CDC50/LEM3 family.
    
 0.458
CBG16211
Protein CBG16211; Belongs to the CDC50/LEM3 family.
    
 0.458
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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