STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpg-2Chondroitin proteoglycan 2; Required for polar body extrusion during cytokinesis in embryo development. Affects cortical granule size. Shown to have roles in meiotic chromosome segregation, osmotic barrier function and polarization in conjunction with cpg-2. Binds chitin (By similarity). (491 aa)    
Predicted Functional Partners:
rme-2
Protein CBR-RME-2.
   
 0.864
chs-1
Protein CBR-CHS-1.
   
  
 0.734
perm-4
Protein CBR-PERM-4.
   
 0.697
perm-2
Protein CBR-PERM-2.
   
 
 0.695
cpg-4
Chondroitin proteoglycan 4.
   
 
 0.683
CBG03877
Protein CBG03877.
   
 0.679
egg-4
Protein CBR-EGG-4.
   
 0.661
syx-4
Protein CBR-SYX-4; Belongs to the syntaxin family.
   
  
 0.638
gna-2
Glucosamine 6-phosphate N-acetyltransferase; Belongs to the acetyltransferase family. GNA1 subfamily.
   
 
 0.634
grsp-3
Protein CBR-GRSP-3.
      
 0.625
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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