Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CBG06863 | dhfr-1 | A8X386 | A8XF85 | Protein CBG06863. | Protein CBG12356; Belongs to the dihydrofolate reductase family. | 0.743 |
CBG06863 | dtmk-1 | A8X386 | A8WP45 | Protein CBG06863. | Protein CBG01006. | 0.950 |
CBG06863 | dut-1 | A8X386 | A8WWK0 | Protein CBG06863. | Protein CBR-DUT-1. | 0.982 |
CBG06863 | mel-32 | A8X386 | Q60V73 | Protein CBG06863. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. | 0.652 |
CBG06863 | rnr-1 | A8X386 | A8XAI1 | Protein CBG06863. | Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.445 |
CBG06863 | thk-1 | A8X386 | A8WXG7 | Protein CBG06863. | Thymidine kinase. | 0.993 |
CBG06863 | tyms-1 | A8X386 | A8XXD3 | Protein CBG06863. | Protein CBG20269. | 0.993 |
CBG12961 | dao-3 | A8XGS0 | A8XQ07 | Protein CBG12961. | Protein CBR-DAO-3. | 0.978 |
CBG12961 | dhfr-1 | A8XGS0 | A8XF85 | Protein CBG12961. | Protein CBG12356; Belongs to the dihydrofolate reductase family. | 0.647 |
CBG12961 | gcst-1 | A8XGS0 | A8X9C1 | Protein CBG12961. | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. | 0.978 |
CBG12961 | mel-32 | A8XGS0 | Q60V73 | Protein CBG12961. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. | 0.995 |
CBG12961 | tyms-1 | A8XGS0 | A8XXD3 | Protein CBG12961. | Protein CBG20269. | 0.962 |
dao-3 | CBG12961 | A8XQ07 | A8XGS0 | Protein CBR-DAO-3. | Protein CBG12961. | 0.978 |
dao-3 | dhfr-1 | A8XQ07 | A8XF85 | Protein CBR-DAO-3. | Protein CBG12356; Belongs to the dihydrofolate reductase family. | 0.786 |
dao-3 | dtmk-1 | A8XQ07 | A8WP45 | Protein CBR-DAO-3. | Protein CBG01006. | 0.509 |
dao-3 | gcst-1 | A8XQ07 | A8X9C1 | Protein CBR-DAO-3. | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. | 0.954 |
dao-3 | mel-32 | A8XQ07 | Q60V73 | Protein CBR-DAO-3. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. | 0.996 |
dao-3 | tyms-1 | A8XQ07 | A8XXD3 | Protein CBR-DAO-3. | Protein CBG20269. | 0.972 |
dhfr-1 | CBG06863 | A8XF85 | A8X386 | Protein CBG12356; Belongs to the dihydrofolate reductase family. | Protein CBG06863. | 0.743 |
dhfr-1 | CBG12961 | A8XF85 | A8XGS0 | Protein CBG12356; Belongs to the dihydrofolate reductase family. | Protein CBG12961. | 0.647 |
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