STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mog-4Protein CBR-MOG-4. (1007 aa)    
Predicted Functional Partners:
gkow-1
Protein CBG17653.
   
 0.993
prp-17
Protein CBR-PRP-17.
   
 0.992
cdc-5l
Protein CBG12532.
   
 0.982
snrp-200
Protein CBG07909.
   
 
 0.981
rnf-113
Zinc finger protein 183.
   
 0.981
syf-1
Protein CBG11979.
   
 0.980
sftb-2
Protein CBG06453.
   
 0.979
prp-8
Protein CBR-PRP-8.
   
 
 0.978
thoc-2
Protein CBR-THOC-2.
   
 0.977
cyn-16
Protein CBR-CYN-16.
   
 0.976
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.