Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CBG24788 | kin-32 | H8WH83 | A8XBU1 | Protein CBG24788. | Protein CBR-KIN-32; Belongs to the protein kinase superfamily. Tyr protein kinase family. | 0.417 |
CBG24788 | let-23 | H8WH83 | A8WPC3 | Protein CBG24788. | Receptor protein-tyrosine kinase. | 0.417 |
CBG24788 | src-1 | H8WH83 | A8Y1X2 | Protein CBG24788. | Tyrosine-protein kinase. | 0.929 |
cav-1 | let-23 | A8XL72 | A8WPC3 | Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. | Receptor protein-tyrosine kinase. | 0.568 |
cav-1 | src-1 | A8XL72 | A8Y1X2 | Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. | Tyrosine-protein kinase. | 0.942 |
fndc-1 | src-1 | A8WT57 | A8Y1X2 | Protein CBG02943. | Tyrosine-protein kinase. | 0.968 |
kin-32 | CBG24788 | A8XBU1 | H8WH83 | Protein CBR-KIN-32; Belongs to the protein kinase superfamily. Tyr protein kinase family. | Protein CBG24788. | 0.417 |
kin-32 | let-23 | A8XBU1 | A8WPC3 | Protein CBR-KIN-32; Belongs to the protein kinase superfamily. Tyr protein kinase family. | Receptor protein-tyrosine kinase. | 0.736 |
kin-32 | src-1 | A8XBU1 | A8Y1X2 | Protein CBR-KIN-32; Belongs to the protein kinase superfamily. Tyr protein kinase family. | Tyrosine-protein kinase. | 0.978 |
let-23 | CBG24788 | A8WPC3 | H8WH83 | Receptor protein-tyrosine kinase. | Protein CBG24788. | 0.417 |
let-23 | cav-1 | A8WPC3 | A8XL72 | Receptor protein-tyrosine kinase. | Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. | 0.568 |
let-23 | kin-32 | A8WPC3 | A8XBU1 | Receptor protein-tyrosine kinase. | Protein CBR-KIN-32; Belongs to the protein kinase superfamily. Tyr protein kinase family. | 0.736 |
let-23 | lin-45 | A8WPC3 | Q61UC4 | Receptor protein-tyrosine kinase. | Raf homolog serine/threonine-protein kinase; Protein kinase that participates in the induction of vulva and has a role in fertility and viability. Acts downstream of the Ras protein let-60. Required for progression of developing oocytes through the pachytene stage. Positively regulates lifespan upstream of mek-2 and mpk-1. | 0.667 |
let-23 | rol-3 | A8WPC3 | Q61G93 | Receptor protein-tyrosine kinase. | Protein roller-3; Involved in larval development and locomotion. | 0.417 |
let-23 | src-1 | A8WPC3 | A8Y1X2 | Receptor protein-tyrosine kinase. | Tyrosine-protein kinase. | 0.993 |
lin-45 | let-23 | Q61UC4 | A8WPC3 | Raf homolog serine/threonine-protein kinase; Protein kinase that participates in the induction of vulva and has a role in fertility and viability. Acts downstream of the Ras protein let-60. Required for progression of developing oocytes through the pachytene stage. Positively regulates lifespan upstream of mek-2 and mpk-1. | Receptor protein-tyrosine kinase. | 0.667 |
lin-45 | mpk-1 | Q61UC4 | A8XZI6 | Raf homolog serine/threonine-protein kinase; Protein kinase that participates in the induction of vulva and has a role in fertility and viability. Acts downstream of the Ras protein let-60. Required for progression of developing oocytes through the pachytene stage. Positively regulates lifespan upstream of mek-2 and mpk-1. | Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. | 0.754 |
lin-45 | pmk-1 | Q61UC4 | A8WRD7 | Raf homolog serine/threonine-protein kinase; Protein kinase that participates in the induction of vulva and has a role in fertility and viability. Acts downstream of the Ras protein let-60. Required for progression of developing oocytes through the pachytene stage. Positively regulates lifespan upstream of mek-2 and mpk-1. | Mitogen-activated protein kinase. | 0.591 |
lin-45 | src-1 | Q61UC4 | A8Y1X2 | Raf homolog serine/threonine-protein kinase; Protein kinase that participates in the induction of vulva and has a role in fertility and viability. Acts downstream of the Ras protein let-60. Required for progression of developing oocytes through the pachytene stage. Positively regulates lifespan upstream of mek-2 and mpk-1. | Tyrosine-protein kinase. | 0.951 |
mpk-1 | lin-45 | A8XZI6 | Q61UC4 | Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. | Raf homolog serine/threonine-protein kinase; Protein kinase that participates in the induction of vulva and has a role in fertility and viability. Acts downstream of the Ras protein let-60. Required for progression of developing oocytes through the pachytene stage. Positively regulates lifespan upstream of mek-2 and mpk-1. | 0.754 |
page 1 of 2