STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdd-1Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. (158 aa)    
Predicted Functional Partners:
thk-1
Thymidine kinase.
    
 0.989
CBG03314
Uridine kinase; Belongs to the uridine kinase family.
    
 0.963
upp-1
Protein CBG00006.
  
 
 0.960
CBG06237
Protein CBG06237.
    
 0.956
CBG13501
Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
  
 
 0.932
CBG16977
Protein CBG16977.
  
 
 0.931
CBG02379
Protein CBG02379.
  
 
 0.924
CBG02038
Protein CBG02038.
     
 0.904
CBG09035
5'-nucleotidase; Belongs to the pyrimidine 5'-nucleotidase family.
     
 0.903
CBG13827
5'-nucleotidase; Belongs to the pyrimidine 5'-nucleotidase family.
     
 0.903
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.