Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CBG12102 | CBG17796 | A8XER6 | A8XRT8 | Protein CBG12102. | Protein CBG17796. | 0.952 |
CBG12102 | daf-18 | A8XER6 | A8XI50 | Protein CBG12102. | Protein CBR-DAF-18. | 0.490 |
CBG12102 | math-33 | A8XER6 | Q60MK8 | Protein CBG12102. | Ubiquitin carboxyl-terminal hydrolase 7; Hydrolase that deubiquitinates target proteins. | 0.870 |
CBG12102 | ubl-1 | A8XER6 | P37164 | Protein CBG12102. | Ubiquitin-like protein 1-40S ribosomal protein S27a; In the N-terminal section; belongs to the ubiquitin family. | 0.998 |
CBG12102 | ubq-1 | A8XER6 | A8X7Y8 | Protein CBG12102. | Protein CBR-UBQ-1. | 0.999 |
CBG12102 | ubq-2 | A8XER6 | A8XMR9 | Protein CBG12102. | Protein CBR-UBQ-2. | 0.908 |
CBG12102 | usp-5 | A8XER6 | A8XXG5 | Protein CBG12102. | Ubiquitin carboxyl-terminal hydrolase. | 0.813 |
CBG17796 | CBG12102 | A8XRT8 | A8XER6 | Protein CBG17796. | Protein CBG12102. | 0.952 |
CBG17796 | daf-18 | A8XRT8 | A8XI50 | Protein CBG17796. | Protein CBR-DAF-18. | 0.490 |
CBG17796 | math-33 | A8XRT8 | Q60MK8 | Protein CBG17796. | Ubiquitin carboxyl-terminal hydrolase 7; Hydrolase that deubiquitinates target proteins. | 0.870 |
CBG17796 | ubl-1 | A8XRT8 | P37164 | Protein CBG17796. | Ubiquitin-like protein 1-40S ribosomal protein S27a; In the N-terminal section; belongs to the ubiquitin family. | 0.998 |
CBG17796 | ubq-1 | A8XRT8 | A8X7Y8 | Protein CBG17796. | Protein CBR-UBQ-1. | 0.993 |
CBG17796 | ubq-2 | A8XRT8 | A8XMR9 | Protein CBG17796. | Protein CBR-UBQ-2. | 0.902 |
CBG17796 | usp-5 | A8XRT8 | A8XXG5 | Protein CBG17796. | Ubiquitin carboxyl-terminal hydrolase. | 0.813 |
daf-16 | daf-18 | A8XFP9 | A8XI50 | Protein CBR-DAF-16. | Protein CBR-DAF-18. | 0.992 |
daf-16 | math-33 | A8XFP9 | Q60MK8 | Protein CBR-DAF-16. | Ubiquitin carboxyl-terminal hydrolase 7; Hydrolase that deubiquitinates target proteins. | 0.984 |
daf-18 | CBG12102 | A8XI50 | A8XER6 | Protein CBR-DAF-18. | Protein CBG12102. | 0.490 |
daf-18 | CBG17796 | A8XI50 | A8XRT8 | Protein CBR-DAF-18. | Protein CBG17796. | 0.490 |
daf-18 | daf-16 | A8XI50 | A8XFP9 | Protein CBR-DAF-18. | Protein CBR-DAF-16. | 0.992 |
daf-18 | math-33 | A8XI50 | Q60MK8 | Protein CBR-DAF-18. | Ubiquitin carboxyl-terminal hydrolase 7; Hydrolase that deubiquitinates target proteins. | 0.860 |
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