STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugt-47Putative UDP-glucuronosyltransferase ugt-47; Belongs to the UDP-glycosyltransferase family. (536 aa)    
Predicted Functional Partners:
slc-17.9
Protein CBG16009.
      
 0.742
dhs-28
Protein CBR-DHS-28; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  
 0.649
dhs-5
Protein CBR-DHS-5.
      
 0.640
CBG01115
Protein CBG01115.
      
 0.631
gst-7
Protein CBR-GST-7; Belongs to the GST superfamily.
      
 0.624
gst-24
Protein CBR-GST-24; Belongs to the GST superfamily.
      
 0.597
dhs-2
Protein CBR-DHS-2; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.583
CBG12326
Protein CBG12326.
      
 0.583
gst-39
Protein CBR-GST-39; Belongs to the GST superfamily.
   
  
 0.416
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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