STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acs-10Fatty Acid CoA Synthetase family. (566 aa)    
Predicted Functional Partners:
pks-1
PolyKetide Synthase.
  
 0.943
npp-11
Nuclear Pore complex Protein.
   
 
 0.906
acdh-8
Acyl CoA DeHydrogenase.
  
 
 0.807
acs-18
AMP-binding domain-containing protein.
 
 
0.792
lipl-2
Lipase; Belongs to the AB hydrolase superfamily. Lipase family.
   
 0.789
dhs-6
SCP2 domain-containing protein.
  
 0.777
ech-9
Enoyl-CoA Hydratase.
  
 0.772
F54C8.1
Probable 3-hydroxyacyl-CoA dehydrogenase F54C8.1; Belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
  
 
 0.754
W09D6.1
AMP-binding domain-containing protein.
  
 0.732
acdh-5
Acyl CoA DeHydrogenase.
  
 
 0.728
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.