Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
B0041.8 | F25H8.1 | B0041.8.1 | F25H8.1a.1 | Uncharacterized protein. | SAM-dependent MTase TRM10-type domain-containing protein. | 0.734 |
B0041.8 | H06I04.3 | B0041.8.1 | H06I04.3a.1 | Uncharacterized protein. | Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. | 0.743 |
B0041.8 | K01G5.5 | B0041.8.1 | K01G5.5.1 | Uncharacterized protein. | Putative H/ACA ribonucleoprotein complex subunit 4; Plays a central role in ribosomal RNA processing. Probable catalytic subunit of H/ACA small nucleolar ribonucleoprotein (H/ACA snoRNP) complex, which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ('psi') residues may serve to stabilize the conformation of rRNAs (By similarity); Belongs to the pseudouridine synthase TruB family. | 0.734 |
B0041.8 | R74.7 | B0041.8.1 | R74.7.1 | Uncharacterized protein. | Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs. | 0.700 |
B0041.8 | T06E6.1 | B0041.8.1 | T06E6.1.1 | Uncharacterized protein. | Uncharacterized protein. | 0.696 |
B0041.8 | W02A11.1 | B0041.8.1 | W02A11.1.2 | Uncharacterized protein. | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA. | 0.765 |
B0041.8 | ZK858.7 | B0041.8.1 | ZK858.7.1 | Uncharacterized protein. | Uncharacterized protein. | 0.725 |
B0041.8 | rbm-34 | B0041.8.1 | F11A10.7.1 | Uncharacterized protein. | RNA Binding Motif protein homolog. | 0.720 |
B0041.8 | trm-2A | B0041.8.1 | H24K24.4a.1 | Uncharacterized protein. | RRM domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.720 |
B0041.8 | wdr-4 | B0041.8.1 | Y102E9.2b.1 | Uncharacterized protein. | tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family. | 0.970 |
F25H8.1 | B0041.8 | F25H8.1a.1 | B0041.8.1 | SAM-dependent MTase TRM10-type domain-containing protein. | Uncharacterized protein. | 0.734 |
F25H8.1 | H06I04.3 | F25H8.1a.1 | H06I04.3a.1 | SAM-dependent MTase TRM10-type domain-containing protein. | Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. | 0.716 |
F25H8.1 | R74.7 | F25H8.1a.1 | R74.7.1 | SAM-dependent MTase TRM10-type domain-containing protein. | Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs. | 0.747 |
F25H8.1 | W02A11.1 | F25H8.1a.1 | W02A11.1.2 | SAM-dependent MTase TRM10-type domain-containing protein. | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA. | 0.681 |
F25H8.1 | ZK858.7 | F25H8.1a.1 | ZK858.7.1 | SAM-dependent MTase TRM10-type domain-containing protein. | Uncharacterized protein. | 0.757 |
F25H8.1 | rbm-34 | F25H8.1a.1 | F11A10.7.1 | SAM-dependent MTase TRM10-type domain-containing protein. | RNA Binding Motif protein homolog. | 0.456 |
F25H8.1 | trm-2A | F25H8.1a.1 | H24K24.4a.1 | SAM-dependent MTase TRM10-type domain-containing protein. | RRM domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.401 |
F25H8.1 | wdr-4 | F25H8.1a.1 | Y102E9.2b.1 | SAM-dependent MTase TRM10-type domain-containing protein. | tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family. | 0.848 |
H06I04.3 | B0041.8 | H06I04.3a.1 | B0041.8.1 | Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. | Uncharacterized protein. | 0.743 |
H06I04.3 | F25H8.1 | H06I04.3a.1 | F25H8.1a.1 | Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. | SAM-dependent MTase TRM10-type domain-containing protein. | 0.716 |
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