STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0205.10Uncharacterized protein. (455 aa)    
Predicted Functional Partners:
W02B12.12
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
  
 0.781
clec-79
C-type lectin domain-containing protein.
   
    0.753
T16A9.5
Uncharacterized protein.
   
    0.753
Y38H8A.3
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
    0.666
C09B9.2
Uncharacterized protein.
   
  
 0.644
T27A3.5
Tyrosine-protein phosphatase.
   
  
 0.641
C08F11.10
Uncharacterized protein.
   
    0.637
T10E9.4
DX domain-containing protein.
   
    0.633
ttbk-4
Protein kinase domain-containing protein.
   
    0.631
Y57G11A.2
Uncharacterized protein.
   
    0.629
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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