STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nlp-27Neuropeptide-Like Protein. (72 aa)    
Predicted Functional Partners:
nlp-34
Neuropeptide-Like Protein.
   
  
 0.854
cnc-2
CaeNaCin (Caenorhabditis bacteriocin).
   
  
 0.811
cnc-5
CaeNaCin (Caenorhabditis bacteriocin).
      
 0.805
cnc-4
CaeNaCin (Caenorhabditis bacteriocin).
   
  
 0.765
cnc-1
CaeNaCin (Caenorhabditis bacteriocin).
      
 0.758
cnc-11
CaeNaCin (Caenorhabditis bacteriocin).
      
 0.740
F59A7.2
Uncharacterized protein.
   
  
 0.714
F26F12.5
Uncharacterized protein.
   
  
 0.706
F32G8.3
Uncharacterized protein.
   
  
 0.705
ssp-37
MSP domain-containing protein.
   
  
 0.700
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.