Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
T04F8.8 | cnc-11 | T04F8.8a.1 | R09B5.13.1 | Uncharacterized protein. | CaeNaCin (Caenorhabditis bacteriocin). | 0.616 |
T04F8.8 | nlp-28 | T04F8.8a.1 | B0213.3.1 | Uncharacterized protein. | Neuropeptide-like protein 28; May have antimicrobial activity; Belongs to the YARP (YGGW-amide related peptide) family. | 0.612 |
cnc-11 | T04F8.8 | R09B5.13.1 | T04F8.8a.1 | CaeNaCin (Caenorhabditis bacteriocin). | Uncharacterized protein. | 0.616 |
cnc-11 | cnc-2 | R09B5.13.1 | R09B5.3a.1 | CaeNaCin (Caenorhabditis bacteriocin). | CaeNaCin (Caenorhabditis bacteriocin). | 0.698 |
cnc-11 | cnc-4 | R09B5.13.1 | R09B5.9.1 | CaeNaCin (Caenorhabditis bacteriocin). | CaeNaCin (Caenorhabditis bacteriocin). | 0.706 |
cnc-11 | nlp-28 | R09B5.13.1 | B0213.3.1 | CaeNaCin (Caenorhabditis bacteriocin). | Neuropeptide-like protein 28; May have antimicrobial activity; Belongs to the YARP (YGGW-amide related peptide) family. | 0.668 |
cnc-11 | nlp-34 | R09B5.13.1 | B0213.17.1 | CaeNaCin (Caenorhabditis bacteriocin). | Neuropeptide-Like Protein. | 0.672 |
cnc-2 | cnc-11 | R09B5.3a.1 | R09B5.13.1 | CaeNaCin (Caenorhabditis bacteriocin). | CaeNaCin (Caenorhabditis bacteriocin). | 0.698 |
cnc-2 | cnc-3 | R09B5.3a.1 | R09B5.8.1 | CaeNaCin (Caenorhabditis bacteriocin). | CaeNaCin (Caenorhabditis bacteriocin). | 0.672 |
cnc-2 | cnc-4 | R09B5.3a.1 | R09B5.9.1 | CaeNaCin (Caenorhabditis bacteriocin). | CaeNaCin (Caenorhabditis bacteriocin). | 0.463 |
cnc-2 | nlp-28 | R09B5.3a.1 | B0213.3.1 | CaeNaCin (Caenorhabditis bacteriocin). | Neuropeptide-like protein 28; May have antimicrobial activity; Belongs to the YARP (YGGW-amide related peptide) family. | 0.643 |
cnc-2 | nlp-34 | R09B5.3a.1 | B0213.17.1 | CaeNaCin (Caenorhabditis bacteriocin). | Neuropeptide-Like Protein. | 0.818 |
cnc-3 | cnc-2 | R09B5.8.1 | R09B5.3a.1 | CaeNaCin (Caenorhabditis bacteriocin). | CaeNaCin (Caenorhabditis bacteriocin). | 0.672 |
cnc-3 | cnc-4 | R09B5.8.1 | R09B5.9.1 | CaeNaCin (Caenorhabditis bacteriocin). | CaeNaCin (Caenorhabditis bacteriocin). | 0.763 |
cnc-3 | nlp-28 | R09B5.8.1 | B0213.3.1 | CaeNaCin (Caenorhabditis bacteriocin). | Neuropeptide-like protein 28; May have antimicrobial activity; Belongs to the YARP (YGGW-amide related peptide) family. | 0.692 |
cnc-4 | cnc-11 | R09B5.9.1 | R09B5.13.1 | CaeNaCin (Caenorhabditis bacteriocin). | CaeNaCin (Caenorhabditis bacteriocin). | 0.706 |
cnc-4 | cnc-2 | R09B5.9.1 | R09B5.3a.1 | CaeNaCin (Caenorhabditis bacteriocin). | CaeNaCin (Caenorhabditis bacteriocin). | 0.463 |
cnc-4 | cnc-3 | R09B5.9.1 | R09B5.8.1 | CaeNaCin (Caenorhabditis bacteriocin). | CaeNaCin (Caenorhabditis bacteriocin). | 0.763 |
cnc-4 | nlp-28 | R09B5.9.1 | B0213.3.1 | CaeNaCin (Caenorhabditis bacteriocin). | Neuropeptide-like protein 28; May have antimicrobial activity; Belongs to the YARP (YGGW-amide related peptide) family. | 0.817 |
cnc-4 | nlp-34 | R09B5.9.1 | B0213.17.1 | CaeNaCin (Caenorhabditis bacteriocin). | Neuropeptide-Like Protein. | 0.843 |
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