STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clec-52C-type LECtin. (308 aa)    
Predicted Functional Partners:
fmo-2
Dimethylaniline monooxygenase [N-oxide-forming].
   
  
 0.807
clec-60
VWFA domain-containing protein.
   
 
 0.786
F53A9.8
Uncharacterized protein.
   
  
 0.771
clec-71
C-type lectin domain-containing protein.
   
  
 0.767
Y65B4BR.1
Lipase_GDSL domain-containing protein.
   
  
 0.712
clec-172
C-type lectin domain-containing protein.
   
  
 0.705
ilys-3
Invertebrate-type lysozyme 3; Has bacteriolytic activity against Gram-positive bacteria. Plays a role in defense against bacterial pathogens. Involved in pharyngeal grinder function by enabling proper lysis of ingested bacteria; Belongs to the glycosyl hydrolase 22 family. Type-I lysozyme subfamily.
   
  
 0.700
lys-5
Lysozyme-like protein 5; Plays a role in resistance to Gram-positive bacteria S.aureus or B.thuringiensis infection.
      
 0.699
clec-61
C-type LECtin.
   
  
 0.673
C33A12.19
Uncharacterized protein.
   
  
 0.671
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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