Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| col-10 | col-125 | B0222.8.1 | C29F4.1.1 | Cuticle collagen 10; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | Col_cuticle_N domain-containing protein. | 0.638 |
| col-10 | col-13 | B0222.8.1 | F15H10.2.1 | Cuticle collagen 10; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | Cuticle collagen 13; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.536 |
| col-10 | col-144 | B0222.8.1 | B0222.6.1 | Cuticle collagen 10; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | Col_cuticle_N domain-containing protein. | 0.943 |
| col-10 | col-166 | B0222.8.1 | T07H6.3.1 | Cuticle collagen 10; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | Col_cuticle_N domain-containing protein. | 0.667 |
| col-10 | col-167 | B0222.8.1 | T10E10.2.2 | Cuticle collagen 10; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | Col_cuticle_N domain-containing protein. | 0.903 |
| col-10 | col-168 | B0222.8.1 | T10E10.1.1 | Cuticle collagen 10; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | Col_cuticle_N domain-containing protein. | 0.861 |
| col-10 | col-169 | B0222.8.1 | T10E10.5.1 | Cuticle collagen 10; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | Col_cuticle_N domain-containing protein. | 0.620 |
| col-10 | col-3 | B0222.8.1 | T28C6.6.1 | Cuticle collagen 10; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | COLlagen; COLlagen structural. | 0.608 |
| col-10 | dpy-13 | B0222.8.1 | F30B5.1.1 | Cuticle collagen 10; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | Cuticle collagen dpy-13; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. Mutations in dpy-13 affects the body shape. | 0.584 |
| col-125 | col-10 | C29F4.1.1 | B0222.8.1 | Col_cuticle_N domain-containing protein. | Cuticle collagen 10; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | 0.638 |
| col-125 | col-13 | C29F4.1.1 | F15H10.2.1 | Col_cuticle_N domain-containing protein. | Cuticle collagen 13; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.462 |
| col-125 | col-144 | C29F4.1.1 | B0222.6.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.601 |
| col-125 | col-166 | C29F4.1.1 | T07H6.3.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.552 |
| col-125 | col-167 | C29F4.1.1 | T10E10.2.2 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.605 |
| col-125 | col-168 | C29F4.1.1 | T10E10.1.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.554 |
| col-125 | col-169 | C29F4.1.1 | T10E10.5.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.440 |
| col-125 | col-3 | C29F4.1.1 | T28C6.6.1 | Col_cuticle_N domain-containing protein. | COLlagen; COLlagen structural. | 0.541 |
| col-125 | dpy-13 | C29F4.1.1 | F30B5.1.1 | Col_cuticle_N domain-containing protein. | Cuticle collagen dpy-13; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. Mutations in dpy-13 affects the body shape. | 0.591 |
| col-13 | col-10 | F15H10.2.1 | B0222.8.1 | Cuticle collagen 13; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | Cuticle collagen 10; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | 0.536 |
| col-13 | col-125 | F15H10.2.1 | C29F4.1.1 | Cuticle collagen 13; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | Col_cuticle_N domain-containing protein. | 0.462 |
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