Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| F09E10.7 | col-145 | F09E10.7c.1 | B0222.7.1 | DUF4440 domain-containing protein. | Putative cuticle collagen 145; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | 0.896 |
| F09E10.7 | ctc-3 | F09E10.7c.1 | MTCE.23.1 | DUF4440 domain-containing protein. | Cytochrome c oxidase subunit 3; Component of the cytochrome c oxidase, the last enzyme in the mitochondrial electron transport chain which drives oxidative phosphorylation. The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol- cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and t [...] | 0.660 |
| F09E10.7 | lact-2 | F09E10.7c.1 | ZK945.1.1 | DUF4440 domain-containing protein. | Beta-lactamase domain-containing protein 2. | 0.896 |
| F09E10.7 | nas-13 | F09E10.7c.1 | F39D8.4.1 | DUF4440 domain-containing protein. | Zinc metalloproteinase nas-13; Metalloprotease. | 0.811 |
| F09E10.7 | sfxn-2 | F09E10.7c.1 | C14F5.4.1 | DUF4440 domain-containing protein. | Sidoreflexin. | 0.807 |
| F09E10.7 | tsfm-1 | F09E10.7c.1 | F55C5.5.1 | DUF4440 domain-containing protein. | Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.699 |
| col-125 | col-145 | C29F4.1.1 | B0222.7.1 | Col_cuticle_N domain-containing protein. | Putative cuticle collagen 145; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | 0.641 |
| col-125 | col-157 | C29F4.1.1 | T11F9.9.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.542 |
| col-125 | col-180 | C29F4.1.1 | C44C10.1.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.642 |
| col-125 | col-77 | C29F4.1.1 | M195.1.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.592 |
| col-145 | F09E10.7 | B0222.7.1 | F09E10.7c.1 | Putative cuticle collagen 145; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | DUF4440 domain-containing protein. | 0.896 |
| col-145 | col-125 | B0222.7.1 | C29F4.1.1 | Putative cuticle collagen 145; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | Col_cuticle_N domain-containing protein. | 0.641 |
| col-145 | col-157 | B0222.7.1 | T11F9.9.1 | Putative cuticle collagen 145; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | Col_cuticle_N domain-containing protein. | 0.621 |
| col-145 | col-180 | B0222.7.1 | C44C10.1.1 | Putative cuticle collagen 145; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | Col_cuticle_N domain-containing protein. | 0.999 |
| col-145 | col-77 | B0222.7.1 | M195.1.1 | Putative cuticle collagen 145; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | Col_cuticle_N domain-containing protein. | 0.639 |
| col-145 | ctc-3 | B0222.7.1 | MTCE.23.1 | Putative cuticle collagen 145; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | Cytochrome c oxidase subunit 3; Component of the cytochrome c oxidase, the last enzyme in the mitochondrial electron transport chain which drives oxidative phosphorylation. The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol- cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and t [...] | 0.669 |
| col-145 | lact-2 | B0222.7.1 | ZK945.1.1 | Putative cuticle collagen 145; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | Beta-lactamase domain-containing protein 2. | 0.700 |
| col-145 | nas-13 | B0222.7.1 | F39D8.4.1 | Putative cuticle collagen 145; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | Zinc metalloproteinase nas-13; Metalloprotease. | 0.824 |
| col-145 | sfxn-2 | B0222.7.1 | C14F5.4.1 | Putative cuticle collagen 145; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | Sidoreflexin. | 0.807 |
| col-145 | tsfm-1 | B0222.7.1 | F55C5.5.1 | Putative cuticle collagen 145; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.699 |
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