STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl-47Mitochondrial Ribosomal Protein, Large. (234 aa)    
Predicted Functional Partners:
mrps-5
Putative 28S ribosomal protein S5, mitochondrial; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.997
mrpl-17
Mitochondrial Ribosomal Protein, Large.
   
 
 0.997
mrpl-23
Probable 39S ribosomal protein L23, mitochondrial; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.995
mrpl-21
Mitochondrial Ribosomal Protein, Large.
   
 
 0.994
mrpl-19
Probable 39S ribosomal protein L19, mitochondrial.
   
 
 0.994
mrpl-22
Mitochondrial Ribosomal Protein, Large; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.994
mrpl-13
Mitochondrial Ribosomal Protein, Large.
   
 
 0.993
mrpl-4
Mitochondrial Ribosomal Protein, Large.
   
 
 0.993
mrpl-30
Mitochondrial Ribosomal Protein, Large.
   
   0.993
mrpl-11
Probable 39S ribosomal protein L11, mitochondrial; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.992
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.