STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0261.7Uncharacterized protein. (351 aa)    
Predicted Functional Partners:
C48B4.11
Uncharacterized protein C48B4.11.
   
  
 0.849
C01G8.1
Uncharacterized protein.
   
  
 0.802
C08F8.3
Uncharacterized protein.
   
  
 0.798
C14B1.2
Uncharacterized protein.
   
  
 0.766
F41G3.6
Uncharacterized protein.
   
  
 0.763
F54D10.5
Uncharacterized protein.
   
  
 0.762
C28A5.1
Uncharacterized protein.
   
  
 0.761
F55A11.7
Uncharacterized protein.
   
  
 0.752
C18E3.9
Uncharacterized protein.
   
  
 0.750
K05C4.7
Armadillo repeat-containing protein 1.
   
  
 0.740
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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