STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0272.4Uncharacterized protein B0272.4. (255 aa)    
Predicted Functional Partners:
maoc-1
MAO-C-like dehydratase domain.
  
 0.902
dhs-6
SCP2 domain-containing protein.
  
 0.896
acox-1.1
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.850
acds-10
ACaD (ACAD, acyl-CoA Dehydrogenase) Sequence homolog.
  
 0.838
acox-3
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.833
F58A6.1
Uncharacterized protein.
  
0.821
dhs-28
SCP2 domain-containing protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 0.814
icl-1
Bifunctional glyoxylate cycle protein; In the C-terminal section; belongs to the malate synthase family.
  
  
 0.811
B0303.3
Uncharacterized protein B0303.3; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.797
acaa-2
ACetyl-CoA Acyltransferase 2 homolog; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.789
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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