Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
B0280.17 | E02D9.1 | B0280.17.1 | E02D9.1a.1 | KH domain-containing protein. | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | 0.758 |
B0280.17 | acs-10 | B0280.17.1 | AH10.1.1 | KH domain-containing protein. | Fatty Acid CoA Synthetase family. | 0.627 |
B0280.17 | bcc-1 | B0280.17.1 | M7.3.1 | KH domain-containing protein. | SAM domain-containing protein. | 0.807 |
B0280.17 | fubl-3 | B0280.17.1 | C36E6.1b.1 | KH domain-containing protein. | FUBp (FUBP) Like. | 0.851 |
B0280.17 | gln-2 | B0280.17.1 | K03H1.1.1 | KH domain-containing protein. | Probable glutamine synthetase. | 0.593 |
B0280.17 | hrpk-1 | B0280.17.1 | F26B1.2a.1 | KH domain-containing protein. | Heterogeneous nuclear ribonucleoprotein K homolog; RNA-binding protein which functions together with alg-1, a component of the miRNA loading complex, to modulate the processing and activity of specific miRNAs such as miR-58 and let-7 to regulate gene expression at the post-transcriptional level during embryonic, hypodermal and neuronal development. Promotes the lsy-6-mediated repression of cog-1 in uterine cells. In embryos, may play a role in the DNA damage response. | 0.610 |
B0280.17 | let-4 | B0280.17.1 | C44H4.2.1 | KH domain-containing protein. | Leucine-rich repeat-containing protein let-4; Required for apical extracellular matrix organization and epithelial junction maintenance. | 0.660 |
B0280.17 | mxt-1 | B0280.17.1 | Y18D10A.8.1 | KH domain-containing protein. | Eukaryotic translation initiation factor 4E-binding protein Mextli homolog; Plays a role in promoting translation. | 0.741 |
B0280.17 | nhl-1 | B0280.17.1 | F54G8.4a.1 | KH domain-containing protein. | RING finger protein nhl-1. | 0.672 |
B0280.17 | vgln-1 | B0280.17.1 | C08H9.2a.1 | KH domain-containing protein. | ViGiLN homolog. | 0.610 |
E02D9.1 | B0280.17 | E02D9.1a.1 | B0280.17.1 | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | KH domain-containing protein. | 0.758 |
E02D9.1 | bcc-1 | E02D9.1a.1 | M7.3.1 | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | SAM domain-containing protein. | 0.714 |
E02D9.1 | fubl-3 | E02D9.1a.1 | C36E6.1b.1 | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | FUBp (FUBP) Like. | 0.760 |
acs-10 | B0280.17 | AH10.1.1 | B0280.17.1 | Fatty Acid CoA Synthetase family. | KH domain-containing protein. | 0.627 |
acs-10 | gln-2 | AH10.1.1 | K03H1.1.1 | Fatty Acid CoA Synthetase family. | Probable glutamine synthetase. | 0.603 |
bcc-1 | B0280.17 | M7.3.1 | B0280.17.1 | SAM domain-containing protein. | KH domain-containing protein. | 0.807 |
bcc-1 | E02D9.1 | M7.3.1 | E02D9.1a.1 | SAM domain-containing protein. | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | 0.714 |
bcc-1 | fubl-3 | M7.3.1 | C36E6.1b.1 | SAM domain-containing protein. | FUBp (FUBP) Like. | 0.807 |
bcc-1 | mxt-1 | M7.3.1 | Y18D10A.8.1 | SAM domain-containing protein. | Eukaryotic translation initiation factor 4E-binding protein Mextli homolog; Plays a role in promoting translation. | 0.697 |
fubl-3 | B0280.17 | C36E6.1b.1 | B0280.17.1 | FUBp (FUBP) Like. | KH domain-containing protein. | 0.851 |
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