Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
B0280.2 | dhs-7 | B0280.2.1 | E04F6.7.1 | Uncharacterized protein B0280.2. | DeHydrogenases, Short chain. | 0.628 |
B0280.2 | sid-3 | B0280.2.1 | B0302.1a.1 | Uncharacterized protein B0280.2. | Tyrosine-protein kinase sid-3; Tyrosine-protein kinase which plays a role in RNA-mediated gene silencing by mediating import of double-stranded RNA (dsRNA) into cells. Not required for import of ingested dsRNA into intestinal cells but involved in subsequent export from intestinal cells to internal tissues. | 0.700 |
B0280.2 | unc-89 | B0280.2.1 | C09D1.1b.1 | Uncharacterized protein B0280.2. | Muscle M-line assembly protein unc-89; Structural component of the muscle M line which is involved in assembly and organization of sarcomere myofilaments. The large isoform a, isoform b, isoform d and isoform f play an essential role in maintaining the organization of sarcomeres but not myofilament alignment during body wall muscle development whereas the small isoform c and isoform d appear to have a minor role. Isoform b and isoform f are required for the organization of unc-15/paramyosin into sarcomere thick filaments in body wall muscles. By binding mel-26, a substrate adapter of t [...] | 0.490 |
B0280.2 | wsp-1 | B0280.2.1 | C07G1.4b.1 | Uncharacterized protein B0280.2. | WASP (Actin cytoskeleton modulator) homolog. | 0.604 |
dhs-7 | B0280.2 | E04F6.7.1 | B0280.2.1 | DeHydrogenases, Short chain. | Uncharacterized protein B0280.2. | 0.628 |
dhs-7 | sid-3 | E04F6.7.1 | B0302.1a.1 | DeHydrogenases, Short chain. | Tyrosine-protein kinase sid-3; Tyrosine-protein kinase which plays a role in RNA-mediated gene silencing by mediating import of double-stranded RNA (dsRNA) into cells. Not required for import of ingested dsRNA into intestinal cells but involved in subsequent export from intestinal cells to internal tissues. | 0.609 |
sid-3 | B0280.2 | B0302.1a.1 | B0280.2.1 | Tyrosine-protein kinase sid-3; Tyrosine-protein kinase which plays a role in RNA-mediated gene silencing by mediating import of double-stranded RNA (dsRNA) into cells. Not required for import of ingested dsRNA into intestinal cells but involved in subsequent export from intestinal cells to internal tissues. | Uncharacterized protein B0280.2. | 0.700 |
sid-3 | dhs-7 | B0302.1a.1 | E04F6.7.1 | Tyrosine-protein kinase sid-3; Tyrosine-protein kinase which plays a role in RNA-mediated gene silencing by mediating import of double-stranded RNA (dsRNA) into cells. Not required for import of ingested dsRNA into intestinal cells but involved in subsequent export from intestinal cells to internal tissues. | DeHydrogenases, Short chain. | 0.609 |
sid-3 | wsp-1 | B0302.1a.1 | C07G1.4b.1 | Tyrosine-protein kinase sid-3; Tyrosine-protein kinase which plays a role in RNA-mediated gene silencing by mediating import of double-stranded RNA (dsRNA) into cells. Not required for import of ingested dsRNA into intestinal cells but involved in subsequent export from intestinal cells to internal tissues. | WASP (Actin cytoskeleton modulator) homolog. | 0.435 |
unc-89 | B0280.2 | C09D1.1b.1 | B0280.2.1 | Muscle M-line assembly protein unc-89; Structural component of the muscle M line which is involved in assembly and organization of sarcomere myofilaments. The large isoform a, isoform b, isoform d and isoform f play an essential role in maintaining the organization of sarcomeres but not myofilament alignment during body wall muscle development whereas the small isoform c and isoform d appear to have a minor role. Isoform b and isoform f are required for the organization of unc-15/paramyosin into sarcomere thick filaments in body wall muscles. By binding mel-26, a substrate adapter of t [...] | Uncharacterized protein B0280.2. | 0.490 |
wsp-1 | B0280.2 | C07G1.4b.1 | B0280.2.1 | WASP (Actin cytoskeleton modulator) homolog. | Uncharacterized protein B0280.2. | 0.604 |
wsp-1 | sid-3 | C07G1.4b.1 | B0302.1a.1 | WASP (Actin cytoskeleton modulator) homolog. | Tyrosine-protein kinase sid-3; Tyrosine-protein kinase which plays a role in RNA-mediated gene silencing by mediating import of double-stranded RNA (dsRNA) into cells. Not required for import of ingested dsRNA into intestinal cells but involved in subsequent export from intestinal cells to internal tissues. | 0.435 |