Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cle-1 | gpn-1 | C36B1.1d.1 | F59D12.4.1 | CoLlagen with Endostatin domain. | GlyPicaN; Belongs to the glypican family. | 0.847 |
| cle-1 | hse-5 | C36B1.1d.1 | B0285.5.1 | CoLlagen with Endostatin domain. | D-glucuronyl C5-epimerase; Converts D-glucuronic acid residues adjacent to N-sulfate sugar residues to L-iduronic acids (By similarity). Plays a role in the early migration of AQR and PQR neurons, which descend from the Q neuroblasts ; Belongs to the D-glucuronyl C5-epimerase family. | 0.825 |
| cle-1 | hst-1 | C36B1.1d.1 | F08B4.6.1 | CoLlagen with Endostatin domain. | Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1; Essential bifunctional enzyme that catalyzes both the N- deacetylation and the N-sulfation of glucosamine (GlcNAc) of the glycosaminoglycan in heparan sulfate. Modifies the GlcNAc-GlcA disaccharide repeating sugar backbone to make N-sulfated heparosan, a prerequisite substrate for later modifications in heparin biosynthesis (Probable). | 0.667 |
| cle-1 | hst-2 | C36B1.1d.1 | C34F6.4.1 | CoLlagen with Endostatin domain. | Heparan sulfate 2-O-sulfotransferase hst-2; Catalyzes the transfer of sulfate to the C2-position of selected hexuronic acid residues within the maturing heparan sulfate (HS). Involved in cell adhesion and guidance by specifically modifying proteoglycans in the extracellular matrix and on the cell surface that are essential for axon migrations. | 0.682 |
| cle-1 | hst-3.1 | C36B1.1d.1 | F40H3.5.1 | CoLlagen with Endostatin domain. | Sulfotransfer_1 domain-containing protein. | 0.437 |
| cle-1 | hst-3.2 | C36B1.1d.1 | F52B10.2.1 | CoLlagen with Endostatin domain. | Sulfotransfer_1 domain-containing protein. | 0.539 |
| cle-1 | hst-6 | C36B1.1d.1 | Y34B4A.3.1 | CoLlagen with Endostatin domain. | Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate. | 0.546 |
| cle-1 | rib-1 | C36B1.1d.1 | F12F6.3a.1 | CoLlagen with Endostatin domain. | Exostosin-1 homolog; Required for the biosynthesis of heparan sulfate by positively regulating N-acetylglucosamine transferase II (GlcNAcT-II) and glucuronyl transferase II (GlcAT-II) activities of glycosyltransferase rib-2. Probably not directly involved in chondroitin sulfate biosynthesis but negatively regulates chondroitin sulfate levels. Maternally required for normal ventral epidermal enclosure and for embryo elongation during the early stages of embryonic development. In addition, involved in the elongation of the pharyngeal isthmus and in the organization of the actin cytoskele [...] | 0.532 |
| cle-1 | sdn-1 | C36B1.1d.1 | F57C7.3a.1 | CoLlagen with Endostatin domain. | Probable syndecan; Cell surface proteoglycan that bears heparan sulfate (By similarity). Required for correct mitotic spindle orientation of the ABar blastomere division plane and this may be through modulation of astral microtubule array, and in association with the wnt-signaling proteins mig-5 and dsh-2. Involved in the migration of AQR and PQR neurons, which descend from the Q neuroblasts. Promotes the axon guidance of D-type motor neurons. | 0.835 |
| gpn-1 | cle-1 | F59D12.4.1 | C36B1.1d.1 | GlyPicaN; Belongs to the glypican family. | CoLlagen with Endostatin domain. | 0.847 |
| gpn-1 | hse-5 | F59D12.4.1 | B0285.5.1 | GlyPicaN; Belongs to the glypican family. | D-glucuronyl C5-epimerase; Converts D-glucuronic acid residues adjacent to N-sulfate sugar residues to L-iduronic acids (By similarity). Plays a role in the early migration of AQR and PQR neurons, which descend from the Q neuroblasts ; Belongs to the D-glucuronyl C5-epimerase family. | 0.901 |
| gpn-1 | hst-1 | F59D12.4.1 | F08B4.6.1 | GlyPicaN; Belongs to the glypican family. | Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1; Essential bifunctional enzyme that catalyzes both the N- deacetylation and the N-sulfation of glucosamine (GlcNAc) of the glycosaminoglycan in heparan sulfate. Modifies the GlcNAc-GlcA disaccharide repeating sugar backbone to make N-sulfated heparosan, a prerequisite substrate for later modifications in heparin biosynthesis (Probable). | 0.814 |
| gpn-1 | hst-2 | F59D12.4.1 | C34F6.4.1 | GlyPicaN; Belongs to the glypican family. | Heparan sulfate 2-O-sulfotransferase hst-2; Catalyzes the transfer of sulfate to the C2-position of selected hexuronic acid residues within the maturing heparan sulfate (HS). Involved in cell adhesion and guidance by specifically modifying proteoglycans in the extracellular matrix and on the cell surface that are essential for axon migrations. | 0.870 |
| gpn-1 | hst-3.1 | F59D12.4.1 | F40H3.5.1 | GlyPicaN; Belongs to the glypican family. | Sulfotransfer_1 domain-containing protein. | 0.846 |
| gpn-1 | hst-3.2 | F59D12.4.1 | F52B10.2.1 | GlyPicaN; Belongs to the glypican family. | Sulfotransfer_1 domain-containing protein. | 0.889 |
| gpn-1 | hst-6 | F59D12.4.1 | Y34B4A.3.1 | GlyPicaN; Belongs to the glypican family. | Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate. | 0.911 |
| gpn-1 | rib-1 | F59D12.4.1 | F12F6.3a.1 | GlyPicaN; Belongs to the glypican family. | Exostosin-1 homolog; Required for the biosynthesis of heparan sulfate by positively regulating N-acetylglucosamine transferase II (GlcNAcT-II) and glucuronyl transferase II (GlcAT-II) activities of glycosyltransferase rib-2. Probably not directly involved in chondroitin sulfate biosynthesis but negatively regulates chondroitin sulfate levels. Maternally required for normal ventral epidermal enclosure and for embryo elongation during the early stages of embryonic development. In addition, involved in the elongation of the pharyngeal isthmus and in the organization of the actin cytoskele [...] | 0.682 |
| gpn-1 | rib-2 | F59D12.4.1 | K01G5.6.2 | GlyPicaN; Belongs to the glypican family. | Exostosin-2 homolog; Glycosyltransferase required for the biosynthesis of heparan sulfate. Initiates heparan sulfate synthesis by transferring GlcNAc to the (GlcA-Gal-Gal- Xyl-)Ser core linker (GlcNAcT-I activity). In association with rib-1, is also responsible for the alternating addition of beta-1-4-linked glucuronic acid (GlcA) and alpha-1-4-linked N-acetylglucosamine (GlcNAc) units to nascent heparan sulfate chains (GlcNAcT-II and GlcAT-II activities). Required for normal ventral epidermal enclosure during the early stages of embryonic development. In addition, involved in the elon [...] | 0.565 |
| gpn-1 | sdn-1 | F59D12.4.1 | F57C7.3a.1 | GlyPicaN; Belongs to the glypican family. | Probable syndecan; Cell surface proteoglycan that bears heparan sulfate (By similarity). Required for correct mitotic spindle orientation of the ABar blastomere division plane and this may be through modulation of astral microtubule array, and in association with the wnt-signaling proteins mig-5 and dsh-2. Involved in the migration of AQR and PQR neurons, which descend from the Q neuroblasts. Promotes the axon guidance of D-type motor neurons. | 0.978 |
| hse-5 | cle-1 | B0285.5.1 | C36B1.1d.1 | D-glucuronyl C5-epimerase; Converts D-glucuronic acid residues adjacent to N-sulfate sugar residues to L-iduronic acids (By similarity). Plays a role in the early migration of AQR and PQR neurons, which descend from the Q neuroblasts ; Belongs to the D-glucuronyl C5-epimerase family. | CoLlagen with Endostatin domain. | 0.825 |
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