STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ckb-2Choline kinase B2; Catalyzes the first step in phosphatidylcholine biosynthesis. Phosphorylates choline. (369 aa)    
Predicted Functional Partners:
pcyt-2.2
CTP_transf_like domain-containing protein.
   
 
 0.948
pcyt-2.1
CTP_transf_like domain-containing protein.
   
 
 0.948
pcyt-1
Putative choline-phosphate cytidylyltransferase; Belongs to the cytidylyltransferase family.
   
 
 0.947
pmt-2
Phosphoethanolamine MethylTransferase.
    
 0.931
gpcp-1
Putative glycerophosphocholine phosphodiesterase GPCPD1 homolog 1.
    
 0.910
gpcp-2
Putative glycerophosphocholine phosphodiesterase GPCPD1 homolog 2.
    
 0.910
eppl-1
Ethanolamine-phosphate phospho-lyase homolog 1.
  
 0.904
ace-1
Acetylcholinesterase 1; Rapidly hydrolyzes choline released into the synapse. It can hydrolyze butyrylthiocholine.
     
  0.900
ace-2
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
     
  0.900
ace-4
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
     
  0.900
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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