STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0303.4Uncharacterized protein B0303.4. (616 aa)    
Predicted Functional Partners:
C16C8.4
Ubiquitin-like domain-containing protein.
   
 
 0.897
ZK688.5
Uncharacterized protein ZK688.5.
   
  
 0.896
F49C12.9
UBA domain-containing protein.
   
 
 0.816
F52C6.12
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
  
 0.668
F32H5.3
Uncharacterized protein.
      
 0.660
F40G9.6
Uncharacterized protein.
      
 0.660
uev-2
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
  
 0.633
ubc-6
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
  
 0.413
uev-3
Ubiquitin-conjugating enzyme E2 variant 3; Possible negative regulator of polyubiquitination (By similarity). May modulate the activity of the p38 MAP kinase pnk-3. May have a role in axon termination and synaptic transmission at motor and mechanosensory neurons. Plays a role in intraflagellar transport in cilia and cilium length regulation ; Belongs to the ubiquitin-conjugating enzyme family.
   
  
 0.412
mlc-3
Myosin, essential light chain.
   
  
 0.411
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.