STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cyp-23A1CYtochrome P450 family; Belongs to the cytochrome P450 family. (534 aa)    
Predicted Functional Partners:
col-45
Col_cuticle_N domain-containing protein.
    
 
 0.815
pks-1
PolyKetide Synthase.
  
 0.811
C50H11.8
Uncharacterized protein.
      
 0.758
F10D2.10
Uncharacterized protein.
      
 0.697
rbc-1
WD_REPEATS_REGION domain-containing protein.
      
 0.692
miz-1
SP-RING-type domain-containing protein.
    
 
 0.670
col-149
Col_cuticle_N domain-containing protein.
    
 
 0.645
acs-20
Fatty Acid CoA Synthetase family.
   
  
 0.568
B0205.4
L-Fucosyltransferase; Belongs to the glycosyltransferase 11 family.
   
    0.537
W09D6.1
AMP-binding domain-containing protein.
  
 0.523
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.