STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0365.9CPG4 domain-containing protein. (224 aa)    
Predicted Functional Partners:
R57.2
DB domain-containing protein.
   
    0.547
clec-225
C-type lectin domain-containing protein.
 
 
    0.516
T03G6.1
Acetyltransf_18 domain-containing protein.
   
    0.463
lpr-4
LiPocalin-Related protein.
   
    0.455
lpr-5
LiPocalin-Related protein.
   
    0.431
Y54G2A.76
Uncharacterized protein.
   
    0.431
K08B12.1
Lipase_3 domain-containing protein.
   
   0.423
K02E10.4
Uncharacterized protein.
   
    0.422
hhat-1
Homolog of Hedgehog AcylTransferase; Belongs to the membrane-bound acyltransferase family.
   
    0.422
lpr-6
LiPocalin-Related protein.
   
    0.406
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.