STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0416.4Uncharacterized RING finger protein B0416.4. (218 aa)    
Predicted Functional Partners:
F14H3.3
Uncharacterized protein.
   
    0.999
F14H3.4
Uncharacterized protein.
   
    0.592
R04D3.2
Uncharacterized protein.
   
    0.538
ceh-49
One cut domain family member.
   
    0.529
F53F8.3
RING-type domain-containing protein.
  
   
0.495
F14D7.2
Uncharacterized protein.
   
    0.457
T02G6.5
F-box domain-containing protein.
   
    0.449
C24D10.5
Uncharacterized protein.
   
    0.428
F54D10.7
Ubiquitin-like domain-containing protein.
   
    0.412
EEED8.3
Uncharacterized protein EEED8.3; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
   
    0.403
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.