STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0432.9Lactamase_B domain-containing protein. (212 aa)    
Predicted Functional Partners:
B0432.8
Uncharacterized protein.
      
 0.971
B0432.13
RING-type domain-containing protein.
 
    
 0.914
inos-1
Inos-1-P_synth domain-containing protein.
      
 0.816
F15E6.6
Uncharacterized protein.
      
 0.758
grl-25
GRound-Like (Grd related).
      
 0.698
xpf-1
ERCC4 domain-containing protein.
      
 0.693
gad-3
Probable aldehyde oxidase gad-3; May be involved in the metabolism of 1-methylnicotinamide (MNA). Linked to regulation of longevity through generation of reactive oxygen species, where it probably functions in a pathway downstream of the sirtuin sir-2.1 and the nicotinamide N-methyltransferase anmt-1. Belongs to the xanthine dehydrogenase family.
      
 0.549
C03F11.2
Uncharacterized protein C03F11.2.
  
     0.536
swip-10
Lactamase_B domain-containing protein.
  
     0.533
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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