STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clec-2C-type LECtin. (411 aa)    
Predicted Functional Partners:
clec-1
C-type lectin domain-containing protein.
      
 0.810
R13H9.5
Protein kinase domain-containing protein.
      
 0.740
fbxa-172
F-box domain-containing protein.
    
 
 0.704
C01G10.5
annotation not available
      
 0.697
math-13
MATH (Meprin-associated Traf homology) domain containing.
      
 0.697
fbxa-176
F-box domain-containing protein.
      
 0.697
AC7.3
Uncharacterized protein.
      
 0.694
str-76
Seven TM Receptor.
      
 0.694
C10G11.1
Uncharacterized protein.
      
 0.694
C11D2.3
Uncharacterized protein.
      
 0.694
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
Server load: low (20%) [HD]