STRINGSTRING
B0464.6 protein (Caenorhabditis elegans) - STRING interaction network
"B0464.6" - Protein B0464.6 in Caenorhabditis elegans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0464.6Protein B0464.6 (B0464.6) mRNA, complete cds (643 aa)    
Predicted Functional Partners:
B0001.4
Probable uridine-cytidine kinase; Protein B0001.4 (B0001.4) mRNA, complete cds; Belongs to the uridine kinase family (248 aa)
     
   
  0.830
Y39B6A.34
APOPT family protein Y39B6A.34, mitochondrial; May play a role in apoptosis (142 aa)
           
  0.819
B0303.4
Protein B0303.4 (B0303.4) mRNA, complete cds (616 aa)
     
   
  0.769
B0511.7
Protein B0511.7 (B0511.7) mRNA, complete cds (302 aa)
     
   
  0.726
F09E5.11
Protein F09E5.11 (F09E5.11) mRNA, complete cds (218 aa)
     
   
  0.724
puf-12
Protein PUF-12 (puf-12) mRNA, complete cds (766 aa)
     
        0.682
C34F6.10
Protein C34F6.10 (C34F6.10) mRNA, complete cds (1465 aa)
           
  0.650
mix-1
Mitotic chromosome and X-chromosome-associated protein mix-1; Essential protein required for both chromosome condensation and segregation and X-chromosome dosage compensation depending on its binding partners. Central component of the condensin I complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases. Converts nicked DNA into positive knotted forms in the presence of type II topoisomerases (By similarity). Central component o [...] (1244 aa)
     
        0.641
cif-1
COP9/Signalosome and eIF3 complex-shared subunit 1; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation (Potential). Component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes. The CSN complex is an essen [...] (390 aa)
     
   
  0.618
F40F4.7
Protein F40F4.7 (F40F4.7) mRNA, complete cds (245 aa)
     
   
  0.613
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Caenorhabditis elegans, Rhabditis elegans, roundworm
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