STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0495.5Uncharacterized protein B0495.5. (729 aa)    
Predicted Functional Partners:
T25G3.4
Probable glycerol-3-phosphate dehydrogenase, mitochondrial.
   
 
  0.794
mrps-34
Mitochondrial Ribosomal Protein, Small.
   
 
  0.749
gta-1
Probable 4-aminobutyrate aminotransferase, mitochondrial.
    
  0.728
eppl-1
Ethanolamine-phosphate phospho-lyase homolog 1.
    
  0.728
T09B4.8
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
  0.728
D2023.4
N-acetyltransferase domain-containing protein.
  
  
 0.534
F10D7.5
NHR domain-containing protein.
      
 0.518
Y73B6BL.29
tRNA pseudouridine synthase.
      
 0.507
tyms-1
Thymidylat_synt domain-containing protein.
  
 
  0.482
C25G4.8
Uncharacterized protein.
    
  0.478
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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