STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0495.9Uncharacterized protein B0495.9. (267 aa)    
Predicted Functional Partners:
alh-13
Probable delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
     
 0.699
mrpl-9
RIBOSOMAL_L9 domain-containing protein.
  
 
 0.693
ymel-1
ATP-dependent zinc metalloprotease YME1 homolog; ATP-dependent metalloprotease that catalyzes the degradation of folded and unfolded proteins with a suitable degron sequence in the mitochondrial intermembrane region (By similarity). Plays an important role in regulating mitochondrial morphology and function (By similarity); In the C-terminal section; belongs to the peptidase M41 family.
    
 0.665
hprt-1
Hypoxanthine phosphoribosyltransferase.
  
  
 0.662
mrpl-2
Ribosomal_L2_C domain-containing protein.
   
 
 0.660
mrpl-13
Mitochondrial Ribosomal Protein, Large.
  
 
 0.646
phb-1
Mitochondrial prohibitin complex protein 1; PHB proteins are essential during embryonic development and are required for somatic and germline differentiation in the larval gonad. A deficiency in PHB proteins results in altered mitochondrial biogenesis in body wall muscle cells.
  
 
 0.639
W04D2.4
C2H2-type domain-containing protein.
   
 
 0.632
mrpl-17
Mitochondrial Ribosomal Protein, Large.
   
 
 0.616
rpl-23
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
   
 
 0.611
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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