STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0507.9Uncharacterized protein. (254 aa)    
Predicted Functional Partners:
fbxa-75
FTH domain-containing protein.
   
    0.487
Y6E2A.7
Uncharacterized protein.
   
    0.455
pals-4
Protein containing ALS2cr12 (ALS2CR12) signature.
   
    0.452
B0507.4
Uncharacterized protein.
   
    0.435
pals-30
Protein containing ALS2cr12 (ALS2CR12) signature.
   
    0.435
B0507.7
Uncharacterized protein.
   
    0.430
fbxa-86
F-box domain-containing protein.
   
    0.428
math-5
MATH (Meprin-associated Traf homology) domain containing.
   
    0.408
ZC196.3
Uncharacterized protein.
   
    0.400
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.