STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pgl-2P granule abnormality protein 2; Transient component of P-granule which is involved in germline development. (532 aa)    
Predicted Functional Partners:
R10F2.6
Tyrosine-protein phosphatase domain-containing protein.
   
  
 0.743
C40H1.2
Uncharacterized protein C40H1.2.
   
  
 0.741
F33G12.6
PPM-type phosphatase domain-containing protein.
      
 0.741
F46F5.11
Uncharacterized protein.
      
 0.741
C14B1.3
Uncharacterized protein.
    
 
 0.707
ZC84.6
Uncharacterized protein.
      
 0.698
upb-1
CN hydrolase domain-containing protein.
      
 0.692
ZK1307.8
Uncharacterized protein.
   
  
 0.692
F23F12.3
Uncharacterized protein F23F12.3.
    
 
 0.664
isw-1
Chromatin-remodeling complex ATPase chain isw-1; Energy-transducing component of a NURF-like (nucleosome- remodeling factor-like) complex, which would catalyze ATP-dependent nucleosome sliding and facilitate transcription of chromatin (Probable). Involved in vulval cell fates. Belongs to the SNF2/RAD54 helicase family. ISWI subfamily.
   
 
 0.617
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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